Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSP----EYMLSHTCLVREPEKFYQFVTENMY-YPNAVPNVIHKKMAEIETEKDV-TIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGMTVTAKDYLK----SDIHT--DCGGVIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKERISLPYPFEMMESDAVKVFEEI
2H4F Chain:A ((3-199))
MKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGP------YSQNVFDIDFFYSH------PEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAEL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2H4F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93486 for 1303 contacts (-71.7/contact) +
2D Compatibility (PS) -20049 + (NN) -11002 + (LL) 3940
1D Compatibility (HY) -18000 + (ID) 3500
Total energy: -142097.0 ( -109.05 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_2H4F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H4F-query.scw
PDB file :
Tito_Scwrl_2H4F.pdb
: