Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFLKELESNLTVSKLMELCFEHPNYKDYCSVISTKKGEVLESLSPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDEWSPHVSMQSLGHGEVMEVDSNFLFS-IFDKKDENNFFMIKVMAEELREAHTFAKLSFLKKEERIRKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRPKPLLVMDKTRL
3I54 Chain:A ((69-244))
-----------------------------------------------GDRLYIIISGKVKI------GRRAPDGRENLLTIMGPSDMFGELSIF-DPGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISDSERL
General information:
TITO was launched using:
RESULT:
Template:
3I54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79007 for 1202 contacts (-65.7/contact) +
2D Compatibility (PS) -19237 + (NN) -13070 + (LL) 4308
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -117506.0 ( -97.76 by residue)
QMean score : 0.331
(partial model without unconserved sides chains):
PDB file :
Tito_3I54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I54-query.scw
PDB file :
Tito_Scwrl_3I54.pdb
: