Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNFFVRSGFIGLILLFVIQVLGIIRGLLIQSGFMDGSIDQTLLGTKLIIVPIIFFTISVIFFLLWFYKDYQKSRFPN
3EQM Chain:A ((227-247))
------------------------------------------------LLIKPDIFFKIS------WLYKKYEKS----
General information:
TITO was launched using:
RESULT:
Template:
3EQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10535 for 83 contacts (-126.9/contact) +
2D Compatibility (PS) -1965 + (NN) 953 + (LL) 4772
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -11075.0 ( -133.43 by residue)
QMean score : 0.841
(partial model without unconserved sides chains):
PDB file :
Tito_3EQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EQM-query.scw
PDB file :
Tito_Scwrl_3EQM.pdb
: