Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITIVKGDITEQEVDVIVNAANSGLLGGGGVDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPIWK---DGEHQEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFDEENLKLYNKLINSEVV
4IQY Chain:A ((68-234))
-KVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRN----LNGCDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKE--DLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEWLAKNHH-EVDRIIFCVFLEVDFKIYKKKMN----
General information:
TITO was launched using:
RESULT:
Template:
4IQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122734 for 1401 contacts (-87.6/contact) +
2D Compatibility (PS) -18568 + (NN) -13439 + (LL) 1200
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -174041.0 ( -124.23 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_4IQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IQY-query.scw
PDB file :
Tito_Scwrl_4IQY.pdb
: