Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKILLVCAAGMSTSLLVTKMKAHATSIGEEIEIEALPVSEASNVVDKMDIVMLGPQVRYQKPQVDELVQGR-IPVIVIDMKDYGMLNGKAVLEKAFAEIG
4MGE Chain:A ((2-96))
--NILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYMLSSMKTLADERNVGIDVINPMHYGMMNGEAVLDHAL----
General information:
TITO was launched using:
RESULT:
Template:
4MGE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88814 for 721 contacts (-123.2/contact) +
2D Compatibility (PS) -9912 + (NN) -774 + (LL) 552
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -110348.0 ( -153.05 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_4MGE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MGE-query.scw
PDB file :
Tito_Scwrl_4MGE.pdb
: