Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLSIIILVTLIIGNVMFFNFISNTLSRDFLFKEQTVVQFK---YKEDYQVSDFNNSIK----TFSETKNINIAQYTFLGERDLNIYGSNCQFAPNINLK-----------KGDYPNKNQFLANEESVDKKQSGVIYHPSKYWSLKVYDFGQIKNVGLSDTFYVSGLDNQNTYQAFLKEFEQYGEVTTKSVDVSWWKYINIPLLMTLLLCFAILFVFTYYYLRYSKQRLLVNRIWGNSELVTLMSLFNKTIIFTLFSVLAILITFVSIVLANGLATYLVEIVWKLLLFNVLLFIFILFPMYFFGLLRIKKIDQAKSDQRMQSSRQHLAINLVIKFVLLCLFIGTFIASYQSLQTLNTRLANIDVWEATKDIFKVKVGVLPEGIQDDLKADKELNDNLSAFYEEGTSKKEMFLMYSNNFQRSETNTFFYETYLKKGSEINSPEGNSVEIDFNYLKLNPIKSIKGQNVGKEAIISDKVLNIIVPNSKKGLEKDIKNTFLDYFYFQKVEVANIYNEALDLPAVALSKEDLRVNIIYAENNQDYFSYDSNTGDFRTGNITDPIAIVYTGNIDSSSIGAHVTSSVYFVDKSNGDAFNAILPLISNSNAREITHVRSVYQEVSSEITTLKWQIYQQLIGTIILALCLCSFMVLLVLSYYRENLYKQLIYHVFGYSFWKSSKWFIISNLFVSVFSGILIFILSKEPVALYFSVVILIIELCAIYFIKEKAIYKDFKAILKGEKYD |
3UAU Chain:A ((128-272)) | ------------------------SNLVFEDFKLGEKVVSDINASLFQQDPKISSFINKLSSDSYTLSFDNSINKQENNYLDNLDIKFYNAKLNFNTNLNINLKEDLLNYLDSKGIKFNTQTLAMDEQAINELLN-------SDFSNTIQKYIILNNFKIDSTLKTEGV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18964 for 585 contacts (32.4/contact) +
2D Compatibility (PS) -12070 + (NN) 3203 + (LL) 50560
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: 52057.0 ( 88.99 by residue)
QMean score : -0.070
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