Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPFSRLFGKKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTVFDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQNLDDEEVAAIALIENLQREELTPIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKMRLLKLPETVQEAVLIKQISERHARSLLALETEEQQVALLAEIAENHWNVKQTEARIQEILGVKKQVATKKTKPKRQAISRDVRIAMNTIKQSVTMVKDNGMDLDFTEEETDDFYQITIQIPKKK |
4UMK Chain:A ((55-218)) | -----------------------------------------------DSLEELAQSIKEHGLLQPVLVVS-ENGRYHLIAGERRLRASKLAKMPTIKAIVVDIEQEKMREVALIENIQREDLNPLELARSYKELLESYQMTQEELSKIVKKSRAHVANIMRLLTLSSKVQNALLEEKITSGHAKVLVGLDGEKQEL-ILNSIIGQKLSVRQTE----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23901 for 1055 contacts (-22.7/contact) +
2D Compatibility (PS) -17709 + (NN) -6823 + (LL) 9320
1D Compatibility (HY) -16400 + (ID) 3550
Total energy: -59063.0 ( -55.98 by residue)
QMean score : 0.479
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