Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLDRVTLEDIEVNLKAEDWREAIQMSARLLLERGAIKESYIDGMIQSVENNGPYIVIAKHIALAHTRPEFGVIHGGLTFATLADGVAF-GSDMFDPVKLIITLAATDSESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG
2OQ3 Chain:A ((3-112))
-LSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGND--EPIKLLIGLSAADADSHI------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66629 for 841 contacts (-79.2/contact) +
2D Compatibility (PS) -11836 + (NN) -3803 + (LL) 3868
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -90700.0 ( -107.85 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_2OQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQ3-query.scw
PDB file :
Tito_Scwrl_2OQ3.pdb
: