Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKTTKIVIASLVSLTMVSNPLLTFAATNDVIDNTTEITTDKETSSTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAF-EMQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLDLSQNTNLTYLA---CDSNKLTNLDVTP---LTKLTYLNCDTNKLTKLDVSQNPLLTYLN---CARNTLTEIDVSHNTQLTEL-DCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFD-CSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHN--------------TQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELD-VSHNTKLKSLSCVNAHIQDFSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQF--GNPMN------------------IEPG---DGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLADDEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLSPSEILNGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDEDNKQLNSTTEISGTIGDNYTTEPKTIEGYTLTTTPGNATGTFTTGSQTVTYVYTKNIEAAEPITVNYVDANGKTLAPSETLNGNVGDTYKATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNTNTDQPLPTKKPTNTTPTKPSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALVIWKKKK |
2OMZ Chain:A ((40-496)) | ---------------------------------------------------------QDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLT--DITPLKNLTKLVDILMNNNQIA--DITPLANLTNLTGLTLFNNQITDIDPLKN--LTNLNRLELSSNTIS--DISALSGLTSLQQLSFGNQVT--DLKPLANLTTLE-------RLDISSNKV-----SDISVLAKL-----TNLESLIATNNQIS--DITPLGILTNLDELSLNGNQLKDIGTLASLTNL----TDL---DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN--ISDISPVSSLTKLQRLFFANNKVSDVSSLANLT--NINWLSAGHNQISDLTPLAN--LTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEP--DITW-NLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140794 for 3058 contacts (-46.0/contact) +
2D Compatibility (PS) -41413 + (NN) 1552 + (LL) 21604
1D Compatibility (HY) -26800 + (ID) 7350
Total energy: -193201.0 ( -63.18 by residue)
QMean score : 0.275
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