Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQVGSLVEMKKPHACVIKETGKKANQWKVLRVGADIKIQCTNCQHVIMMSRYDFERKLKKVLQP
3NA7 Chain:A ((211-237))
-------------------------KIYTEVLTSGDM-ITCPYCGRILYAEGA------------
General information:
TITO was launched using:
RESULT:
Template:
3NA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14417 for 120 contacts (-120.1/contact) +
2D Compatibility (PS) -2987 + (NN) -1194 + (LL) 3080
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -17718.0 ( -147.65 by residue)
QMean score : 0.273
(partial model without unconserved sides chains):
PDB file :
Tito_3NA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NA7-query.scw
PDB file :
Tito_Scwrl_3NA7.pdb
: