Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNLIRLAEIFDVSLDEHVLAKTNEVKVERIYENKPLDLRKYNKIYWFIFRNIIRSLLIILAILTFL
3FYM Chain:A ((52-75))
-GFIRKYASVVNIEPNQLIQAHQDEIPSNQAEW----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FYM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4096 for 107 contacts (-38.3/contact) +
2D Compatibility (PS) -2695 + (NN) -2252 + (LL) 3596
1D Compatibility (HY) -1200 + (ID) 150
Total energy: -6797.0 ( -63.52 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_3FYM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FYM-query.scw
PDB file :
Tito_Scwrl_3FYM.pdb
: