Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKMIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHL-GTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTNDFQKTMQKYNGLK
1RYN Chain:A ((6-189))---LIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTNQ-FKSLLGTGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKK----RHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVR-TLVLKGFSGSTERFNLVQ


General information:
TITO was launched using:
RESULT:

Template: 1RYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124845 for 1457 contacts (-85.7/contact) +
2D Compatibility (PS) -18660 + (NN) -4045 + (LL) 248
1D Compatibility (HY) -14400 + (ID) 3250
Total energy: -164952.0 ( -113.21 by residue)
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_1RYN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RYN-query.scw
PDB file : Tito_Scwrl_1RYN.pdb: