Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELIFRIFEMKKTLYITNKLFFANWFVPVIGAVLIQVIGIIVSRRLV--VKLLPDDYKFNLYIALLLFVPILASILLFLIYFQKRDFTSLGFTKDNNVLTTISGFITGSLLMFFIYICHWLSGFVEISSSNSFSFGPFFFLFLAYFIQSLTEEILFRGYVMTTVTKFKGSFAGVLCNSMLFSFIHFRNYGITAIALFNLFLLGIIFSILFNMTKNILFVTGVHTTWNFTMGCVLGNKVSGGYSPVSLFRITENSSFALWNGGDFGFEGGVLCSLILVGCLAYFSLESVRVSVRY
1KF6 Chain:D ((28-105))-------------------------IAPVMILLVGILLPLGLFPGDALSYERVLAFA-QSFIGRVFLFLMIVLPLWCGLHRMH-HAMHDLKIHVPA-GKWVFYGLAAILTVVTLIGVVTI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1KF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48470 for 381 contacts (-127.2/contact) +
2D Compatibility (PS) -7546 + (NN) -116 + (LL) 15232
1D Compatibility (HY) -6000 + (ID) 400
Total energy: -47300.0 ( -124.15 by residue)
QMean score : 0.248

(partial model without unconserved sides chains):
PDB file : Tito_1KF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KF6-query.scw
PDB file : Tito_Scwrl_1KF6.pdb: