Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTNKLKMRETMIAYAFLAPILLFFLIFVFAPMVMGFVTSFFNYSMTQFTFIGLANYNRMFHDSIFMKSLINTVIIVIGSV----PVVVFFSLFVAANTYEKNVFSRSFYRCV---FFLP-----VVTGSVAVTVVWKWIYDPMSGILNYILKSGHVIEQNISWLGDKHWALLAIIIILLTTSVGQPIILYIAAMGNIDNSLCEAARVDGANEMQVFWQIKWPSLLPTTLYIAVITTINSFQC-FALIQLLTSGGPNYSTSTLMYYLYEKAFKLSEYGYANTMGVFLAVMIALISFAQFKILGNDVEY |
| 4TQV Chain:A ((7-284)) | ------DIKRDWLLYAMLLPTIIWFLIFLYKPMI-GLQMAFKQ------PWIGFDHFVTLFQSEQFIRAIKNTLTLSGLSLLFGFPMPILLALMI------NEVYSKGYRKAVQTIVYLPHFISIVIVAGLVVTFL-----SPSTGVVNNMLS--WIGLDRVYFLTQPEWFRPIYISSNIWKEAGFDSIVYLAAIMSINPALYESAQVDGATRWQMITRITLPCIVPTIAVLLVIRLGHILEVGFEYIILLYQPTTYETADVISTYIYRLGLQGARYDIATAAGIFNAVVALVIVLFANHMSRRITK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4TQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -183791 for 1696 contacts (-108.4/contact) +
2D Compatibility (PS) -26401 + (NN) -7159 + (LL) 2204
1D Compatibility (HY) -28800 + (ID) 3450
Total energy: -247397.0 ( -145.87 by residue)
QMean score : 0.113
|
|
|