Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRTVAIDIGGTMIKHGIVDNLGCIVEASELATEAYKGGPGILQKVCQIIDNYLTEGSIDGIAISSAGMVDPDEGCIFYSGPQIPNYAGTQFKKVLEDTYQVRTEIENDVNCAGLAEAVSGSAKDSSIALCLTIGTGIGGCLIIDKTVFHGFSNSACEVGYMH------LSDGDFQDLASTTALI--ADVAKAHGDEISRWDGRRIFQEAKEGNEKCIASIDRMINYLGQGIANMVYVVNPEKVVLGGGIMAQKDYLQDKLSESLKRNLVTSLAEKTAIVFAQHENQAGMLGAYYHFKNRG |
4HTL Chain:A ((5-289)) | --KIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFLAENT----DVTGIAVSAPGYVNPKTGLITMGG-AIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAFRPGKYTLNETTTMLVLRRQYAELTGRPLEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAE-----LKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HTL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170981 for 2294 contacts (-74.5/contact) +
2D Compatibility (PS) -29430 + (NN) -9849 + (LL) 568
1D Compatibility (HY) -18400 + (ID) 4500
Total energy: -232592.0 ( -101.39 by residue)
QMean score : 0.403
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