Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPIISIIMGSKSDWGTMQKTAEVLDNFGIAYEKKVVSAHRAPDLMFKHAEEARGRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKTRALSGLDSLYSIVQMPGGVPVATMAIGEAGATNAALTALRILSIEDQNLADALAHFHEEQGKIAEESSNELI
4B4K Chain:A ((2-157))
-KS-LVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREAIEKDVREG-----
General information:
TITO was launched using:
RESULT:
Template:
4B4K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124752 for 1307 contacts (-95.4/contact) +
2D Compatibility (PS) -16973 + (NN) -8404 + (LL) 444
1D Compatibility (HY) -16400 + (ID) 4950
Total energy: -171035.0 ( -130.86 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_4B4K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B4K-query.scw
PDB file :
Tito_Scwrl_4B4K.pdb
: