Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIIVHAFINSGKI-GVVEVLFATSDDKLLMTKMSEFQRHYPGDYLAIYDLPLDTDLNKLSHYPSVAISKEDFHEEKANETNENS
4J8P Chain:A ((97-136))
----IINTFIESGDFAGKTVIPFATSGSSSISNAEKELQTNYPGINWGKGRLLNGASRETVKQWIKK-------------------
General information:
TITO was launched using:
RESULT:
Template:
4J8P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10786 for 164 contacts (-65.8/contact) +
2D Compatibility (PS) -4401 + (NN) -2770 + (LL) 1700
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -18607.0 ( -113.46 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_4J8P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J8P-query.scw
PDB file :
Tito_Scwrl_4J8P.pdb
: