Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVKLFDQTGKEVSSVELNEAIFGIEPNESVVFDVVISQRASLRQGTHAVKNRSAVSGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYGYKLPQKVRRLALKSVYSAKVAEDKFVAVENLSFAAPKTAEFASVLSALSIDSKVLVILEEGNEFAALSARNLPNVTVATATTASVLDIVNADKLLVTKEAISTIEGVLA
3J3W Chain:E ((2-207))
-PKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNIIVLEDLTLDTAKTKEMAAILKGLSVEKKALIVTADANEAVALSARNIPGVTVVEANGINVLDVVNHEKLLITKAAVEKVEEVLA
General information:
TITO was launched using:
RESULT:
Template:
3J3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47829 for 1424 contacts (-33.6/contact) +
2D Compatibility (PS) -21539 + (NN) -4404 + (LL) 208
1D Compatibility (HY) -21600 + (ID) 6450
Total energy: -101614.0 ( -71.36 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_3J3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J3W-query.scw
PDB file :
Tito_Scwrl_3J3W.pdb
: