Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIYHMILCNSDIMKILAIIKSLPLNDCWLCAGTLRNFIWNKLSGINETLTSDIDVVFFDKNISYEETVVLEQQLKDNYPQYDWELKNEFYMNTHSPNTPKYTSSK-DAISKFP------EKCTAVGARLD---------DRNQLELYLPYGEEEILNFIVSPTPYFEEDLLRYNVYLKRVDKKKWNNIWPRLTIIKK |
| 1LYN Chain:A ((54-120)) | ----------------------------------------------------------------------------------------NRRYMQTHWANYMLWINKKIDALGRTPVVGDYTRLGAEIGRRIDMAYFYDFLKDKNMIPKYLPYMEEINRMRPADVPVKYM------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4591 for 197 contacts (23.3/contact) +
2D Compatibility (PS) -4895 + (NN) 1238 + (LL) 9296
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: 6780.0 ( 34.42 by residue)
QMean score : 0.107
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