Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPDAQDLGKSYGIRPSFIIAQAALDSDFGEKILANK----YHNLFGLLAEPGTPSITLN------DSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGATGKKDSYTIMVSVKNPKTLVQKLQDSGFDNDKKYAKKMTEIIDLYDLTRYDK |
3VWO Chain:A ((2-144)) | --------------------------------------------QAFVDATWPQAAKAAQSLGVPAHFLVAQAALETGWGKSQIRNKDGTPSYNLFNIKAGSNWTGKVVEARTVEYENGQRKVRVERFRAYDSYEQAFQDYADLV-----GNSPRYAKVAGKTDGHAFARALQEGGYATDPSYADKLARVINGNALRQRLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59034 for 960 contacts (-61.5/contact) +
2D Compatibility (PS) -13997 + (NN) -258 + (LL) 3984
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -77805.0 ( -81.05 by residue)
QMean score : 0.549
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