Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRYKAQISYDGSAFSGFQRQPNCRTVQEEIERTLKRLNSGNDVIIHGAGRTDAGVHAYGQVIHFDLPQARDVEKLRFGLDTQCPDDIDIVKVEQVSDDFHCRYDKHIKTYEFLVDIGRPKNPMMRNYATHYPYPVIIELMQEAIKDLVGTHDFTGFTASGTSVENKVRTIFDAKIQFEASKN--LLIFTFTGNGFLYKQVRNMVGTLLKIGNGRMPISQIKTILQAKNRDLAGPTAAGNGLYLKEIIYEDKECFSNFRK
2NQP Chain:A ((16-255))-------IEYDGSKYYGWQRQNEVRSVQEKLEKALSQV-ANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRA----VQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPM


General information:
TITO was launched using:
RESULT:

Template: 2NQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123129 for 1914 contacts (-64.3/contact) +
2D Compatibility (PS) -25467 + (NN) -9290 + (LL) 524
1D Compatibility (HY) -17600 + (ID) 4250
Total energy: -179212.0 ( -93.63 by residue)
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_2NQP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NQP-query.scw
PDB file : Tito_Scwrl_2NQP.pdb: