Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIRLSKFIKMIVVILFLISVAASFYFFHVAQVRDDKSFISNGQRKPGNSLYAYDKSFDKLLKQKIEMTNQNIKQVAWYVPAAKKTHKTAVVVHGFANSKENMKAYGWLFHKLGYNVLMPDNIAHGESHGQLIGYGWND-RENII---KWTEMIVDKNPSSQITLFGVSMGGATVMMASGEKLPSQVVNIIEDCGYSSVWDELKFQAKEMYGL---PAFP-----------------LLYEVSTISKIRAGFSYGQASSVEQLKKNNLPALFIHGDKDNFVPT---SMVYDNYKATAGKKELYIVKGAKHAKSFETEPEKYEKRISSFLKKYEK |
| 4FBL Chain:A ((55-281)) | -------------------------------------------------------------------------------------------LVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTADIVAAMRWLEERCDV-----LFMTGLSMGGALTVWAAGQ-FPERFAGIM------PINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVPAIKHLITIGAVAEM-LLPRVKCPALIIQSREDHVVPPHNGELIYNGIGST--EKELLWLENSYHVATLDNDKELILERSLAFIRKH-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81056 for 1682 contacts (-48.2/contact) +
2D Compatibility (PS) -21099 + (NN) -4342 + (LL) 8084
1D Compatibility (HY) -13600 + (ID) 2750
Total energy: -114763.0 ( -68.23 by residue)
QMean score : 0.280
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