Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFGKKLGFLALLMSIVLILGACGKTGLGNSTGNSTKNVTKKSAKNLKLGVSISTTNNPYFVAMKDGIDKYASNKKISIKVADAQDDAARQADDVQNFISQNVDAILINPVDSKAIVTAIKSANNANIPVILMDRGSEGGKVLTTVASDNVAAGKMAADYAVKKLGKKAKAFELSGVPGASATVDRGKGF-HSVAKSKLDILSSQSANFDRAKALNTTQNMIQGHKDVQIIFAQNDEMALGAAQAVKSAGLQNVLIVGIDGQPDAHDAIKKGDISATIAQQPAKMGEIAIQAAIDHYKGKKVEKETISPIYLVTKDNVEKYNW |
2GX6 Chain:A ((5-271)) | ------------------------------------------------IALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGVKILLINPVDSDAVGNAVKMANQANIPVITLDRQATKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLASQPADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVEVADKVLKGEKVQAKYPVDLKLVVKQ------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91660 for 2486 contacts (-36.9/contact) +
2D Compatibility (PS) -28819 + (NN) -13986 + (LL) 2732
1D Compatibility (HY) -19200 + (ID) 6150
Total energy: -157083.0 ( -63.19 by residue)
QMean score : 0.554
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