Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNMMKYISELTTLIALAGLMVIITLINPNFLTTNNLLNLLLQVTANGFIAFGMTFVILTGGIDLSVGSILALSSALTAGLIGHGVPVGIAIVLSVALGGILGMLNGLFISYGKLAPFIVTLATMTIFRGATLVYSNGNPITAGLSDSFLFQFLGQGYIVGIPFPVILMFLTFIILYILLHKTAFGKSVYALGGNEKAAYISGIKLNKVKIIIYTISGIMASISGLI----------------------ITSRLSSAQPTAGASY-----EMDAIAAVVLGGTSLSGGKGRIIGTLIGALIIGVLNNGLNIIGVSAFWQQVVKGIVILMAVLLDRFKVAK |
| 2QQM Chain:A ((288-389)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19130 for 315 contacts (-60.7/contact) +
2D Compatibility (PS) -7776 + (NN) 332 + (LL) 15872
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -16102.0 ( -51.12 by residue)
QMean score : -0.179
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