Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPEL-DEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQI-----RQAMISLTERWQAK--RINFQLDSKPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
| 4U7O Chain:A ((31-261)) | ------------------------------------------------------------------------------------------------------------------------------------IDNDRKQFVSNVSHELRTPLTSLRSYIEALSDGAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVI-ISISDQGLGIPRADLGHVFDRFFRVDK---QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88599 for 1469 contacts (-60.3/contact) +
2D Compatibility (PS) -23537 + (NN) -13301 + (LL) 12332
1D Compatibility (HY) -17600 + (ID) 4000
Total energy: -134705.0 ( -91.70 by residue)
QMean score : 0.482
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