Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHG-HYDDALECIEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGEL-APIEDAKAMVE-TGIDFLAAGIGNIHGPYPA--NWEGLDLDHLKKLTEAVPGFPIVLHGGSGIPDDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA |
| 3Q94 Chain:A ((6-288)) | --LVSMKEMLNKALEGKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT----GVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTKAVR---------EVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSNGKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119539 for 2496 contacts (-47.9/contact) +
2D Compatibility (PS) -31590 + (NN) -21421 + (LL) 1224
1D Compatibility (HY) -24000 + (ID) 6900
Total energy: -202226.0 ( -81.02 by residue)
QMean score : 0.602
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