Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIELSDDVIATVVGGSATEIFGVVGMASKSAIKDNFQALLRKENYAKGV---VVRSSEAGIAVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
3DG6 Chain:A ((242-337))
--------DESVPTPADVTREVLGGSATAI-------SIKTARTGFTGSTRVHHLAEGLGLDMVMGNQIDGQIGTACTVSFGTAFERTSRHAGE-----LSNFLDMSDDLLTVPLQISDGQLHR
General information:
TITO was launched using:
RESULT:
Template:
3DG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7944 for 653 contacts (-12.2/contact) +
2D Compatibility (PS) -9412 + (NN) -494 + (LL) 1724
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -20676.0 ( -31.66 by residue)
QMean score : 0.036
(partial model without unconserved sides chains):
PDB file :
Tito_3DG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DG6-query.scw
PDB file :
Tito_Scwrl_3DG6.pdb
: