Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLEIKNLHVSIEDKEILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTAGEILFDGEDILELEVDERARLGLFLAMQYPSEVPGITNAEFIRAAMNAGKADDDKISIRQFITKLDEKMELLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRGEGFGAMIITHYQRLLNYITPDKVHVMMDGKVVLSGGPELAVRLEKEGYAQIAEELGLEYKEEV
2D2F Chain:A ((2-246))
-SQLEIRDLWASIDGETILKGVNLVVPKGEVHALMGPNGAGKSTLGKILAGDPEYTVERGEILLDGENILELSPDERARKGLFLAFQYPVEVPGVTIANFLRLALQAKLGRE--VGVAEFWTKVKKALELLDWDESYLSRYLNEGFSGGEKKRNEILQLLVLEPTYAVLDETDSGLDIDALKVVARGVNAMRGPNFGALVITHYQRILNYIQPDKVHVMMDGRVVATGGPELALELEAKGYEWLKEKVK-------
General information:
TITO was launched using:
RESULT:
Template:
2D2F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143166 for 1963 contacts (-72.9/contact) +
2D Compatibility (PS) -26438 + (NN) -9176 + (LL) 668
1D Compatibility (HY) -30000 + (ID) 7650
Total energy: -215762.0 ( -109.91 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_2D2F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D2F-query.scw
PDB file :
Tito_Scwrl_2D2F.pdb
: