Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKYILKRVAILLVTLWVVITLSFFLMQILPGTPYNNPKLTEEMIALLNKQYGLDKPVWQQYLTYLWNVLHGDFGTSYQSVNQPVSRMISLRLGVSVHLGVQALVFGVLGGILVGAISARHKNDKVDGILSVIATLGISMPSFIIGILLLDYFGFKWNLLPLSGWGTFSQTILPSLALGLPTLASVSRFFRSEMIETLNSDYVQLARSKGMTIRQVTRKHAYRNSMIPILTLIGPLAAGLLTGSALIEQIFSIPG----IGQQFVT---SIPTKDY-PVIMGTTIVYAVMLMVAILITDVVISIVDPRVRLQ |
| 2IGB Chain:A ((26-109)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYR----DDHEPLVKGTNVPFPVTERNVILVDDVLFTGRTVRAAMD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44425 for 381 contacts (-116.6/contact) +
2D Compatibility (PS) -7374 + (NN) 1386 + (LL) 17444
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -37669.0 ( -98.87 by residue)
QMean score : 0.234
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