Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQSDVKLTNTQEHILMLLSQEQLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3KP2 Chain:A ((26-110))
-------------------------LLKDLQTEYGISAEQSHVLNMLSIEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL----------IIKLSNKGKKYIKERKAIMSHIASDMTSDFDSKEIEKVRQVLEIIDYRIQSYTS
General information:
TITO was launched using:
RESULT:
Template:
3KP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51726 for 499 contacts (-103.7/contact) +
2D Compatibility (PS) -7219 + (NN) 1288 + (LL) 3120
1D Compatibility (HY) -7600 + (ID) 1100
Total energy: -63237.0 ( -126.73 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3KP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KP2-query.scw
PDB file :
Tito_Scwrl_3KP2.pdb
: