Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKILPFTHNKQIKVGPLDNLGRATYSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFSGMNNVPENLVTMTKYLNTGF----SENNPDGMLYYENRLDSWLANHKNFWLDYKVTPIYEGNNLVPSRVELQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTSPLAKIDYKTGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWYSLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ |
2XH3 Chain:A ((48-246)) | ----------------------------------------------TVSSKLLPFTANYQLQLGELDNLNRATFSHIQLQDRHET-------------------------SSWVMNRGHLVGYQFCGLNDEPRNLVAMTAWLATGAYSGANDSNPEGMLYYENRLDSWLALHPDFWLDYKVTPIYSGNEVVPRQIELQYVGIDSSGELLTIRLNSNKESIDENGVTTVILENSAPNINLDYLNGTATPKN------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -33161 for 1276 contacts (-26.0/contact) +
2D Compatibility (PS) -18507 + (NN) -7581 + (LL) 10480
1D Compatibility (HY) -19600 + (ID) 5350
Total energy: -73719.0 ( -57.77 by residue)
QMean score : 0.623
|
|
|