Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIATINKNDLIALGFSEGTSKRIIRQGKELLIARGFRVYQNKRIGTIPASIATELLGFDVQNSSLSRG
1PHT Chain:A ((29-49))
-ILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGRKKISPP----------
General information:
TITO was launched using:
RESULT:
Template:
1PHT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1838 for 79 contacts (-23.3/contact) +
2D Compatibility (PS) -2208 + (NN) 184 + (LL) 1388
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -5474.0 ( -69.29 by residue)
QMean score : 0.084
(partial model without unconserved sides chains):
PDB file :
Tito_1PHT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PHT-query.scw
PDB file :
Tito_Scwrl_1PHT.pdb
: