Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIDKKEFLALIASIILLIFASVTFFLFKDHGTTQMDTVESSVNHVSDSQLTEAQDMLDKFEKKPSEKLLKDVELALNKLSNSSKKEALQKRFKKAKDKYLKDEADKKATKDATDLVEILEQAPSEENVLKAEAAVNKLTVKESKEALQKRIDTVKTQYGLIG-NQTPSSSVAETTEQGTANPASQDTSSYVNQNVAPTYEQPQTNNTPVTPGVNNTVPTPGTGTAPATNGTGVAQ |
2A4A Chain:A ((87-185)) | ------------------------------------------------------------------EKVLNDTEKALD---DGADEIDLVINYKKIIEN--TDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARRFLSDNFRIGSSSLVIKLRKVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48508 for 683 contacts (71.0/contact) +
2D Compatibility (PS) -10229 + (NN) -3632 + (LL) 6020
1D Compatibility (HY) -2400 + (ID) 1500
Total energy: 36767.0 ( 53.83 by residue)
QMean score : 0.376
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