Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEDQKHPFFEPKKETDGLEFKDAKEMTVEEAVRKDSEIKAGITEEDSILDKYIKQHRDEVASQKFETKSSDFANLDTASLDDFIKKQREELSAMLAAEELSKKLDNSVSQEQDTEANAVSPKEESSQEQENSVTPVPPLNTEAEPTATEPDSTIADSEEYKSSSKKRGGIVGTLIALILLLIVAIFGYNYFKNNNSTNSQTATSQSSSSKATTTSSEEDKKASQNLDNFNKSYANFFVDDKKTQLKNSEFDKLSELEKKVDALKGTKYYGKVKVKFDSLKRQ-IDAVKAVNDKF---KSPAVVDGKKSEKLEVKDGANFDSLDSKTLNTGNASLDSLLHSIVSTGRNQVKQSEEQASSNKVSDTQITEQPNVTNGQSSSSAATINNQAAGTASGNLERNRSRVPYNNAAIADTGNPAWIFNPGVLEKIVATSQARGYFSGNNYILEPVNIINGNGYYNMFKLDGTYLFSINAKTGYFVGNAPGRADSLDY |
| 2QEJ Chain:C ((93-196)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKKNNQSSETNIHLLVNKLDGGNLDATNDS---FLINKEEVSLKELDFKIRKQLVEKYGLYQGTSKYGKITIILNGGKKQEID----LGDKLQFERMGDVLNSKDINKIEVTLKQI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QEJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 50801 for 655 contacts (77.6/contact) +
2D Compatibility (PS) -10666 + (NN) -1014 + (LL) 19888
1D Compatibility (HY) -6400 + (ID) 1550
Total energy: 51059.0 ( 77.95 by residue)
QMean score : 0.089
|
|
|