Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYLSKLSDLDPSLMDADSEQIYIPKVLFEHNDFKGLTYKEILLYSFLLNRLREPLDFIQKGYDDNEDTYVHFKVEDLCELLNQSKTTVISLKKRLAQYGLIEEVKAGSHQPNRIYLTDKLVPYIKG
4PQL Chain:A ((18-114))
-----------------------IPKVFFTSENYKNLTNDMKIAYAILRDRLN--LSIKNSWVDEDGNIYFVYSNEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNILYLMKPIVTERDI
General information:
TITO was launched using:
RESULT:
Template:
4PQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49356 for 636 contacts (-77.6/contact) +
2D Compatibility (PS) -10398 + (NN) -4127 + (LL) 1492
1D Compatibility (HY) -8800 + (ID) 1600
Total energy: -72789.0 ( -114.45 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_4PQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PQL-query.scw
PDB file :
Tito_Scwrl_4PQL.pdb
: