Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLE-LLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGNIGFPASEVVQAADDKDILVMELSSFQLMGVKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELAKTTKATIVPFSTTEKVDGAYVQDKQ-----LFYKGENIMLVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGF--DNTKVILIAGGLDRGNEFDELIPDITGLK-HMVVLGESASRVKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFIDTFESLRGE |
| 1E0D Chain:A ((3-429)) | ------YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTR---MTPPGLDKLPEAVERHTGSLNDEWLMAADL--IVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLD--DECELYVLELSSFQLETTSSLQAVAATILNVTED-----FGLQQYRAAKLRI---YENAKVCVVNADDALTMPI---ADERCVSFGVNM---GDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLL-GGDGKSADFSPLARYLNGDNVRLYCFGRDGAQL--AALRPEVA-EQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -197893 for 3666 contacts (-54.0/contact) +
2D Compatibility (PS) -44903 + (NN) -23261 + (LL) 2392
1D Compatibility (HY) -27200 + (ID) 6550
Total energy: -297415.0 ( -81.13 by residue)
QMean score : 0.519
|
|
|