Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLILKNRLKELRARDGINQTELAKLTGVSRQTISLIERGEYTPSVIIAMKVSQVFKESLENVFSLVSTEE
2GZU Chain:A ((4-61))
------NNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLEDIFQWQPE--
General information:
TITO was launched using:
RESULT:
Template:
2GZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27831 for 401 contacts (-69.4/contact) +
2D Compatibility (PS) -6374 + (NN) -2027 + (LL) 804
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: -43128.0 ( -107.55 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_2GZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZU-query.scw
PDB file :
Tito_Scwrl_2GZU.pdb
: