Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIFSAIDSKFWASIMENPWMILIHLMDIIIVAVLIYKFIKALAGTKIMSLIQGVILFIIIRFVSEWIGLTTITFLMNQIVTYGVIAGVVIFAPEIRTGLEKFGRTPQLFTQRSQLSSDEKLVDALVKAVAYMSPRKIGALISIERTQTLQEYIATGIPLDADISSELLINIFIPNTPLHDGAVIVKDKKIATACSYLPLSESSSISKEFGTRHRAAIGLSENSDALTVIVSEETGGISVALKGEFLHDLSKDSFEAILRTQLIQNQEENSKLAWYNQLLRRK
2FB5 Chain:A ((80-198))
-----------------------------------------------------------------------------------------------------------------------------ITTAIQHLSARKHGALIVVERNETLEALIQTGTTLNAHLTAPLLESIFYPGNPLHDGAVLVKNNHIVSAANILPLTKSTEVDPELGTRHRAAIGLSEKSDALILVVSEETGRTSFALNGILYTISL--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104286 for 920 contacts (-113.4/contact) +
2D Compatibility (PS) -12833 + (NN) -6844 + (LL) 15336
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -122627.0 ( -133.29 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_2FB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FB5-query.scw
PDB file :
Tito_Scwrl_2FB5.pdb
: