Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKPIKISKFKKNVSDSHFIHFFTVFSGIFLVMTVIILQVMRYGVYSSVDSSLKYISTHPKNYINMVMSRTAAYLDNSNIASVKLKPGGQTVANTDIILFTSEEEVINYFDAFSNYQFLKPNKKNLGGISELTLTNIFGQDETYHAVTVKVNNPAYPNVTYMTAIVNIDQLVNAKERYEKIIIFVMTTFWIISIGASIYLAKWAQKPIIENYERQKAFVENASHELRTPLAVLQNRLETL----FRKPNATILENSENIASSLDEVRNMRILTTNLLNLARRDDG---IKPELAVIKPTLFDSIFENYDLIAQENG------KNFTGHNMIQDSFKTDKTLLKQLMTILFDNAIKYTDNDGSIDFTISETDKYLFLEIADNGPGISEEDKVRIFDRFYRVDKARTRQQGGFGLGLSLAQQIVNSLRGNITVIDNKPRGSIFKIKLPKVKG |
| 4U7N Chain:A ((39-261)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSNVSHELRTPLTSLRSYIEALSDGAWKDPEVA----PGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNIN-EMFNYVLDRFDMILKKDDNYYTIKREFTKRDLWVE-IDTDK--FTQVLDNIMNNAIKYSPDGGVVTCRLLETHNQVIISISDQGLGIPRADLGHVFDRFFR-----------TGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91815 for 1372 contacts (-66.9/contact) +
2D Compatibility (PS) -21036 + (NN) -10512 + (LL) 18076
1D Compatibility (HY) -18400 + (ID) 3400
Total energy: -127087.0 ( -92.63 by residue)
QMean score : 0.487
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