Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQSNHRYHGPLIEFEIEYSYIKIFPWIGLFISCIGLYASNFGDPLGFIKFIFSVCIFVNLVSIIISLFLKKYLIF
2LKE Chain:A ((2-10))
-----------------------------------------------------------------LGFFKRQYKDM
General information:
TITO was launched using:
RESULT:
Template:
2LKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3144 for 29 contacts (-108.4/contact) +
2D Compatibility (PS) -883 + (NN) -391 + (LL) 4996
1D Compatibility (HY) -800 + (ID) 100
Total energy: -322.0 ( -11.10 by residue)
QMean score : 0.894
(partial model without unconserved sides chains):
PDB file :
Tito_2LKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LKE-query.scw
PDB file :
Tito_Scwrl_2LKE.pdb
: