Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKQKLLLLIGGLLIMIMMTACKDSKIPENRTKEEYQAEQNFKLFFEFLAQKYKDLNKIQKYLLLVSDSGDALDLEYFYSIQDLKKNKDLGKFETRKSQIEKPGGYNELENKEVPFEYFKNNIVYPKGKPNITFDDFIIGAMDTKELKKLKVKSYLLKHPETELKDITYELPTQSKLIKK |
4M0N Chain:A ((186-206)) | ---------------------------------------------------------------------------------------------------------------------------------PNVVFDDYIYGEHDNKSLEAVLNAIQYSTGIRYRKEESRIVLYKTS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 290 for 53 contacts (5.5/contact) +
2D Compatibility (PS) -2181 + (NN) -770 + (LL) 9552
1D Compatibility (HY) -2400 + (ID) 500
Total energy: 3991.0 ( 75.30 by residue)
QMean score : 0.181
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