Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISRKVALVTGASAGFGAAIVTKLVSDGYSVIGCARRMDKLKCFGEKFSEGYFYPLQMDITSRESVDKALESLPKNLQSIDLLVNNAGLALGLDKSYEADFEDWMTMINTNVVGLIYLTRCILPKMVEVNRGLIINLGSTAGTIPYPGANVYGASKAFVKQFSLNLRADLAGTKIRVTNLEPGLCEGTEFSTVRFKGDHKRVEKLYEGAHAIQAEDIANTVSWVASQPEHININRIEIMPVSQTYGPQPVYRD
3ASV Chain:A ((2-247))
-----IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN-LYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSYAGLNVHRQ
General information:
TITO was launched using:
RESULT:
Template:
3ASV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147060 for 2011 contacts (-73.1/contact) +
2D Compatibility (PS) -26030 + (NN) -9255 + (LL) 640
1D Compatibility (HY) -23200 + (ID) 6400
Total energy: -211305.0 ( -105.07 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3ASV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASV-query.scw
PDB file :
Tito_Scwrl_3ASV.pdb
: