Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDLEKIIKAIKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETF-------------YHSGKFAVLPLDFYYPGKGKSGDLPPRKGFAEKWHPLILKEMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKSYKDYLPDYLPLVHPSPRNQIWLKKNPWFEKDLIVDLQKIVADILKD |
3PIK Chain:A ((65-180)) | ---------------------------------------------LKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTGLNASFDLDFFGRLKNMSE--------AERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29410 for 472 contacts (62.3/contact) +
2D Compatibility (PS) -10468 + (NN) 2126 + (LL) 2404
1D Compatibility (HY) -2000 + (ID) 1550
Total energy: 19922.0 ( 42.21 by residue)
QMean score : -0.185
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