Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIREQEFVNQYHYDARNLEWEEENGTPKTNFEVTFQLANRDEAAKVTSIVAVLQFVIVRDEFVISGVISQMAHIQGRLINEPSEFSQDEVENLAAPLLEIVKRLTYEVTEIALDRPGVTLEFNS
2HNG Chain:A ((9-128))
----REQEFVSQYHFDARNFEWENENGAPETKVDVNFQLLQHDQENQVTSLIVILSF-IVFDKFVISGTISQVNHIDGRIVNEPSELNQEEVETLARPCLN-LNRLTYEVTEIALDLPGINLEF--
General information:
TITO was launched using:
RESULT:
Template:
2HNG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3648 for 783 contacts (-4.7/contact) +
2D Compatibility (PS) -13018 + (NN) -4349 + (LL) 996
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -26919.0 ( -34.38 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_2HNG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HNG-query.scw
PDB file :
Tito_Scwrl_2HNG.pdb
: