Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEDIKKQVRRAFDFRMAIRVYN-NNDIPKEDMEYILDTAWLSPSSVGLEGWRFLVLDRQTIAKFRDKLKEVAWGAQYQLDTASHFVLLLAEKGAYYNADSMINSLVRRGLGDPAALESRIPLYKSFQENDMKIDSERSLWDWTAKQTYIALGNMMTAAAMIGVDSCPIEGFDYEKVNNILSKEGLIDDKKEAISCMVSFGYRLREPKHSRARKERQEVITWVE
2H0U Chain:A ((13-200))
----------------RFAAKKYDPNRRISQKDWEALVEVGRLAPSSIGLEPWKMLLLKN-----------------------ASHFVIYLARKGVTYDSDYVKKVMHEVKKRDYDTNSRFAQIIKNFQENDMKLNSERSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAYLEEKGYLNTAEFGVSVMACFGYRNQEITPKTRWKTEVIYEVIE-
General information:
TITO was launched using:
RESULT:
Template:
2H0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98617 for 1224 contacts (-80.6/contact) +
2D Compatibility (PS) -17883 + (NN) -4891 + (LL) 3484
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -136957.0 ( -111.89 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_2H0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H0U-query.scw
PDB file :
Tito_Scwrl_2H0U.pdb
: