Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVFSVKTFNNINQIGLQELGNRFQIDGDMSENPDAYII--RSQNLHNQDF---PSNLKAIARAGAGTNNIPIEEASAQGIVVFNTPGANANAVKEAVIAALLLSARDYLGANRWVNTLTGTDIPKQIEAGKKAFAGNEIAGKKLGVIGLGAIGARIANDARRLGMTVLGYDPYVSIETAWNISSHVQRVKEIKDIFETCDYITIHVPLTNETKHTFDAEAFSIMKKGTTIINFARAELVNNQELFKAIETGVVKRYITDFGDKE-----------LLNQKGITVFPHVGGSTDEAELNCAIMASQTIRCFMETGEITNSVNFPNVHQIQTAPFRITLINKNVPNIVAKISTAVSELGINIDNIINRSKGDYAYTLIDLDETDNNKISTLIEEFEGDENIVRVRLIAKQQ |
| 2P9C Chain:A ((53-409)) | ---------------------------------DAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHR----GVWNKLAAG--SF---EARGKKLGIIGYGHIGTQLGILAESLGMYVYFYD----IENKLPLGNATQ-VQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPLHVGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDI-EADEDVAEKALQAMKAIPGTIRARLLY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193579 for 2720 contacts (-71.2/contact) +
2D Compatibility (PS) -37885 + (NN) -15216 + (LL) 2276
1D Compatibility (HY) -20800 + (ID) 5350
Total energy: -270554.0 ( -99.47 by residue)
QMean score : 0.452
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