Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVRLAFPNEIDQIM-LLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGY--------------AWVGIEDGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQT---FLQGLIEGHKGPDFRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVRLAYQKIKEKGETSIYREIDERNPM
2OH1 Chain:A ((16-165))
--VRFAAPTDRLKINDLMIDTARW-LKESGSTQWS-------------DILHGFDVHNIEQRIELGEVALFETEAGALAG-AMIIRKTPSDWDTDLWEDLAIDKAYYL--HRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKKNGFYLYQKELSQK-----------------
General information:
TITO was launched using:
RESULT:
Template:
2OH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42581 for 806 contacts (-52.8/contact) +
2D Compatibility (PS) -14375 + (NN) -8355 + (LL) 1908
1D Compatibility (HY) -9200 + (ID) 2350
Total energy: -74953.0 ( -92.99 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_2OH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OH1-query.scw
PDB file :
Tito_Scwrl_2OH1.pdb
: