Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVGKLDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWLSQEINVERIVL
2OHV Chain:A ((1-264))
MDTRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAP-----KKQIKEYTWELVNFLLTQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQ-AVEHRFFTTANPEIFQEIASIWLKQKINVEHVTL
General information:
TITO was launched using:
RESULT:
Template:
2OHV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -244719 for 2321 contacts (-105.4/contact) +
2D Compatibility (PS) -27666 + (NN) -4797 + (LL) -196
1D Compatibility (HY) -38000 + (ID) 9450
Total energy: -324828.0 ( -139.95 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2OHV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OHV-query.scw
PDB file :
Tito_Scwrl_2OHV.pdb
: