Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDIGIIVVSHSKNIAQGVVDLISEVAKDVSITYVGGTEDGEIGTSFDQVQQIVEQNDKKTLLAFFDLGSAKMNLELVADFSEKNIIINSVPVVEGAYTAAALLQAGADLDSIQSQLAELTINK
3CR3 Chain:C ((2-121))
----GIVIVSHSPEIASGLKKLIREVAKNISLTAIGGLENGEIGTSFDRVMNAIEENEADNLLTFFDLGSARMNLDLVSEMTDKELTIFNVPLIEGAYTASALLEAGATFEAIKEQLEKMLIEK
General information:
TITO was launched using:
RESULT:
Template:
3CR3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96130 for 947 contacts (-101.5/contact) +
2D Compatibility (PS) -13298 + (NN) -6924 + (LL) 308
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -133344.0 ( -140.81 by residue)
QMean score : 0.707
(partial model without unconserved sides chains):
PDB file :
Tito_3CR3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CR3-query.scw
PDB file :
Tito_Scwrl_3CR3.pdb
: