Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTSKQRAFLKSEAHSMKPIIQIGKNGLNDQIKTSVRNALDARELIKVTLLQNTDEDIHDVAEVLEDEIGCDTVLKIGRILILYKESARKENRKISVKVKAVKSN
1LN4 Chain:A ((3-98))
-LSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPT---KERKISLPLE-----
General information:
TITO was launched using:
RESULT:
Template:
1LN4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48870 for 663 contacts (-73.7/contact) +
2D Compatibility (PS) -10427 + (NN) -2289 + (LL) 808
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -69278.0 ( -104.49 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1LN4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LN4-query.scw
PDB file :
Tito_Scwrl_1LN4.pdb
: